bionty.Gene#

class bionty.Gene(species='human', source=None, version=None, **kwargs)#

Bases: Bionty

Gene.

1. Ensembl Edits of terms are coordinated and reviewed on: https://www.ensembl.org/

Parameters:

  • species – name of Species entity.

  • source – The key of the source in the local.yml versions file. Get all available databases with bionty.display_available_sources.

  • version – The version of the ontology. Typically a date or an actual version. Get available versions with bionty.display_available_sources.

Notes

Biotypes: https://www.ensembl.org/info/genome/genebuild/biotypes.html Gene Naming: https://www.ensembl.org/info/genome/genebuild/gene_names.html

Attributes

fields property#

All Bionty entity fields.

source property#

Name of the source.

species property#

The name of Species Bionty.

version property#

The name of version entity Bionty.